STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF09380.1Glycosyltransferase involved in cell wall bisynthesis. (417 aa)    
Predicted Functional Partners:
SMF09362.1
Predicted glycosyl transferase.
 
     0.959
SMF09326.1
Peptide/nickel transport system permease protein.
 
     0.955
SMF09335.1
Peptide/nickel transport system permease protein.
 
     0.954
SMF09391.1
Predicted glycosyl transferase.
     0.951
SMF09400.1
ABC-type multidrug transport system, ATPase and permease component.
 
  0.894
SMF09371.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.889
SMF09344.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.865
SMF35915.1
Hypothetical protein.
 
 0.842
SMF68732.1
Peptide/nickel transport system substrate-binding protein.
 
     0.825
SMF09352.1
PH domain-containing protein.
       0.824
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.