STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF13092.1Ribosomal-protein-alanine N-acetyltransferase. (196 aa)    
Predicted Functional Partners:
SME98427.1
N-acylneuraminate cytidylyltransferase/3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).
  
 
 0.785
SME93254.1
Glutamate synthase (NADPH) large subunit.
   
 
 0.763
SMF03967.1
Amino acid adenylation domain-containing protein.
  
 
 0.693
SMF69128.1
Protein N-acetyltransferase, RimJ/RimL family.
 
   
 0.693
SMF17284.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.662
SME90659.1
Amino acid adenylation domain-containing protein.
  
  
 0.636
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.636
SMF03952.1
Amino acid adenylation domain-containing protein.
  
  
 0.636
SMF80776.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.584
SMF81000.1
Pyruvate dehydrogenase E1 component beta subunit/2-oxoisovalerate dehydrogenase E1 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.568
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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