STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF13748.1Spermidine/putrescine transport system permease protein. (271 aa)    
Predicted Functional Partners:
potA-5
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.958
SMF13735.1
Spermidine/putrescine transport system permease protein.
 
 
0.944
SME89557.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.928
SMF38204.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.912
SMF65333.1
Spermidine/putrescine transport system permease protein.
 
  0.907
SME89579.1
Spermidine/putrescine transport system permease protein.
 
  0.891
SMF37298.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.884
SMF80828.1
Spermidine/putrescine transport system permease protein.
 
 
  0.857
SME99397.1
Spermidine/putrescine transport system permease protein.
 
  0.851
SMF13893.1
Putative spermidine/putrescine transport system substrate-binding protein/spermidine/putrescine transport system substrate-binding protein.
 
 
  0.848
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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