STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF16252.1GNAT-family acetyltransferase TIGR03103. (569 aa)    
Predicted Functional Partners:
SMF16237.1
Asparagine synthase (glutamine-hydrolysing).
 
 
 0.974
SMF16260.1
Hydrolase, peptidase M42 family.
 
  
 0.955
SME90659.1
Amino acid adenylation domain-containing protein.
    
 0.936
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
 0.936
SMF03952.1
Amino acid adenylation domain-containing protein.
    
 0.936
SMF69237.1
Amino acid adenylation domain-containing protein.
  
 
 0.935
SMF69245.1
Amino acid adenylation domain-containing protein.
  
 
 0.930
SMF03967.1
Amino acid adenylation domain-containing protein.
    
 0.912
SME93254.1
Glutamate synthase (NADPH) large subunit.
    
 0.852
SMF36201.1
Urea carboxylase precursor.
   
  0.849
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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