Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SME97793.1 | SMF24347.1 | SAMN05428998_102109 | SAMN05428998_10883 | Dimethylamine/trimethylamine dehydrogenase. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.634 |
SME97793.1 | SMF24354.1 | SAMN05428998_102109 | SAMN05428998_10884 | Dimethylamine/trimethylamine dehydrogenase. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.634 |
SME97793.1 | SMF24368.1 | SAMN05428998_102109 | SAMN05428998_10885 | Dimethylamine/trimethylamine dehydrogenase. | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.695 |
SME97793.1 | SMF30065.1 | SAMN05428998_102109 | SAMN05428998_11084 | Dimethylamine/trimethylamine dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.924 |
SMF13685.1 | SMF24368.1 | SAMN05428998_105186 | SAMN05428998_10885 | Acyl-CoA synthetase (NDP forming). | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.693 |
SMF17679.1 | SMF17729.1 | SAMN05428998_106115 | SAMN05428998_106117 | methylmalonyl-CoA mutase C-terminal domain-containing protein. | Virulence factor. | 0.893 |
SMF17679.1 | SMF17779.1 | SAMN05428998_106115 | SAMN05428998_106122 | methylmalonyl-CoA mutase C-terminal domain-containing protein. | Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. | 0.832 |
SMF17679.1 | SMF24368.1 | SAMN05428998_106115 | SAMN05428998_10885 | methylmalonyl-CoA mutase C-terminal domain-containing protein. | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.759 |
SMF17729.1 | SMF17679.1 | SAMN05428998_106117 | SAMN05428998_106115 | Virulence factor. | methylmalonyl-CoA mutase C-terminal domain-containing protein. | 0.893 |
SMF17729.1 | SMF17779.1 | SAMN05428998_106117 | SAMN05428998_106122 | Virulence factor. | Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. | 0.925 |
SMF17729.1 | SMF24368.1 | SAMN05428998_106117 | SAMN05428998_10885 | Virulence factor. | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.659 |
SMF17779.1 | SMF17679.1 | SAMN05428998_106122 | SAMN05428998_106115 | Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. | methylmalonyl-CoA mutase C-terminal domain-containing protein. | 0.832 |
SMF17779.1 | SMF17729.1 | SAMN05428998_106122 | SAMN05428998_106117 | Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. | Virulence factor. | 0.925 |
SMF17779.1 | SMF24368.1 | SAMN05428998_106122 | SAMN05428998_10885 | Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain. | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.733 |
SMF24341.1 | SMF24347.1 | SAMN05428998_10882 | SAMN05428998_10883 | Transcriptional regulator, XRE family with cupin sensor. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.839 |
SMF24341.1 | SMF24354.1 | SAMN05428998_10882 | SAMN05428998_10884 | Transcriptional regulator, XRE family with cupin sensor. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.826 |
SMF24341.1 | SMF24368.1 | SAMN05428998_10882 | SAMN05428998_10885 | Transcriptional regulator, XRE family with cupin sensor. | Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.795 |
SMF24347.1 | SME97793.1 | SAMN05428998_10883 | SAMN05428998_102109 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Dimethylamine/trimethylamine dehydrogenase. | 0.634 |
SMF24347.1 | SMF24341.1 | SAMN05428998_10883 | SAMN05428998_10882 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Transcriptional regulator, XRE family with cupin sensor. | 0.839 |
SMF24347.1 | SMF24354.1 | SAMN05428998_10883 | SAMN05428998_10884 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.991 |
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