STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF28962.14Fe-4S dicluster containing protein. (377 aa)    
Predicted Functional Partners:
SMF28939.1
NAD(P)H-flavin reductase.
 
 0.997
SMF28899.1
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
  
 0.988
SMF28926.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
 
  
 0.988
SMF28888.1
Hydrogenase maturation protease.
 
   
 0.956
SMF28950.1
Cyclic nucleotide-binding domain-containing protein.
 
     0.956
SME93254.1
Glutamate synthase (NADPH) large subunit.
    
 0.857
SMF82385.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.787
SMF08890.1
L-lactate dehydrogenase complex protein LldF.
  
 0.760
SMF17284.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.755
SMF72611.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.755
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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