Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMF30461.1 | SMF37193.1 | SAMN05428998_110111 | SAMN05428998_112131 | Transcriptional regulator, IclR family. | DNA-binding transcriptional regulator, MarR family. | 0.421 |
SMF37176.1 | SMF37193.1 | SAMN05428998_112130 | SAMN05428998_112131 | Protein of unknown function. | DNA-binding transcriptional regulator, MarR family. | 0.802 |
SMF37176.1 | SMF37198.1 | SAMN05428998_112130 | SAMN05428998_112132 | Protein of unknown function. | Carbon-monoxide dehydrogenase small subunit. | 0.746 |
SMF37176.1 | SMF37213.1 | SAMN05428998_112130 | SAMN05428998_112133 | Protein of unknown function. | Carbon-monoxide dehydrogenase medium subunit. | 0.799 |
SMF37176.1 | SMF37239.1 | SAMN05428998_112130 | SAMN05428998_112134 | Protein of unknown function. | Xanthine dehydrogenase, molybdenum binding subunit apoprotein. | 0.808 |
SMF37176.1 | SMF37249.1 | SAMN05428998_112130 | SAMN05428998_112135 | Protein of unknown function. | Dihydroorotase. | 0.803 |
SMF37193.1 | SMF30461.1 | SAMN05428998_112131 | SAMN05428998_110111 | DNA-binding transcriptional regulator, MarR family. | Transcriptional regulator, IclR family. | 0.421 |
SMF37193.1 | SMF37176.1 | SAMN05428998_112131 | SAMN05428998_112130 | DNA-binding transcriptional regulator, MarR family. | Protein of unknown function. | 0.802 |
SMF37193.1 | SMF37198.1 | SAMN05428998_112131 | SAMN05428998_112132 | DNA-binding transcriptional regulator, MarR family. | Carbon-monoxide dehydrogenase small subunit. | 0.618 |
SMF37193.1 | SMF37213.1 | SAMN05428998_112131 | SAMN05428998_112133 | DNA-binding transcriptional regulator, MarR family. | Carbon-monoxide dehydrogenase medium subunit. | 0.618 |
SMF37193.1 | SMF37239.1 | SAMN05428998_112131 | SAMN05428998_112134 | DNA-binding transcriptional regulator, MarR family. | Xanthine dehydrogenase, molybdenum binding subunit apoprotein. | 0.689 |
SMF37193.1 | SMF37249.1 | SAMN05428998_112131 | SAMN05428998_112135 | DNA-binding transcriptional regulator, MarR family. | Dihydroorotase. | 0.664 |
SMF37198.1 | SMF37176.1 | SAMN05428998_112132 | SAMN05428998_112130 | Carbon-monoxide dehydrogenase small subunit. | Protein of unknown function. | 0.746 |
SMF37198.1 | SMF37193.1 | SAMN05428998_112132 | SAMN05428998_112131 | Carbon-monoxide dehydrogenase small subunit. | DNA-binding transcriptional regulator, MarR family. | 0.618 |
SMF37198.1 | SMF37213.1 | SAMN05428998_112132 | SAMN05428998_112133 | Carbon-monoxide dehydrogenase small subunit. | Carbon-monoxide dehydrogenase medium subunit. | 0.987 |
SMF37198.1 | SMF37239.1 | SAMN05428998_112132 | SAMN05428998_112134 | Carbon-monoxide dehydrogenase small subunit. | Xanthine dehydrogenase, molybdenum binding subunit apoprotein. | 0.989 |
SMF37198.1 | SMF37249.1 | SAMN05428998_112132 | SAMN05428998_112135 | Carbon-monoxide dehydrogenase small subunit. | Dihydroorotase. | 0.633 |
SMF37213.1 | SMF37176.1 | SAMN05428998_112133 | SAMN05428998_112130 | Carbon-monoxide dehydrogenase medium subunit. | Protein of unknown function. | 0.799 |
SMF37213.1 | SMF37193.1 | SAMN05428998_112133 | SAMN05428998_112131 | Carbon-monoxide dehydrogenase medium subunit. | DNA-binding transcriptional regulator, MarR family. | 0.618 |
SMF37213.1 | SMF37198.1 | SAMN05428998_112133 | SAMN05428998_112132 | Carbon-monoxide dehydrogenase medium subunit. | Carbon-monoxide dehydrogenase small subunit. | 0.987 |
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