STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF37313.1Putative spermidine/putrescine transport system permease protein. (277 aa)    
Predicted Functional Partners:
SMF37285.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
  0.924
SME92631.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.923
SMF37298.1
Putative spermidine/putrescine transport system permease protein.
 
 
0.922
SMF37329.1
Putative spermidine/putrescine transport system ATP-binding protein/spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.909
SME88685.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.893
SME89579.1
Spermidine/putrescine transport system permease protein.
 
 
  0.879
SMF65333.1
Spermidine/putrescine transport system permease protein.
 
 
  0.866
SMF38204.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.860
SMF13735.1
Spermidine/putrescine transport system permease protein.
 
 
  0.857
SMF38216.1
Spermidine/putrescine transport system permease protein.
 
 
  0.845
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.