SMF43411.1 protein (Tistlia consotensis) - STRING interaction network

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Score

SMF43411.1

Uncharacterized metal-binding protein YceD, DUF177 family. (186 aa)

Predicted Functional Partners:

rpsC

0.990

rpmF

0.979

rplK

0.928

rplA

0.920

rplJ

0.915

rpsF

0.911

rpsB

0.910

rpsP

0.909

infC

0.909

rplU

0.908

Your Current Organism:

Tistlia consotensis

NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMF43411.1	infC	SAMN05428998_11557	SAMN05428998_1045	Uncharacterized metal-binding protein YceD, DUF177 family.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.909
SMF43411.1	rplA	SAMN05428998_11557	SAMN05428998_1549	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.920
SMF43411.1	rplJ	SAMN05428998_11557	SAMN05428998_1548	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.915
SMF43411.1	rplK	SAMN05428998_11557	SAMN05428998_15410	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.928
SMF43411.1	rplU	SAMN05428998_11557	SAMN05428998_104111	Uncharacterized metal-binding protein YceD, DUF177 family.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.908
SMF43411.1	rpmF	SAMN05428998_11557	SAMN05428998_11558	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.979
SMF43411.1	rpsB	SAMN05428998_11557	SAMN05428998_12966	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.910
SMF43411.1	rpsC	SAMN05428998_11557	SAMN05428998_1159	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.990
SMF43411.1	rpsF	SAMN05428998_11557	SAMN05428998_13551	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.911
SMF43411.1	rpsP	SAMN05428998_11557	SAMN05428998_104280	Uncharacterized metal-binding protein YceD, DUF177 family.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.909
infC	SMF43411.1	SAMN05428998_1045	SAMN05428998_11557	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Uncharacterized metal-binding protein YceD, DUF177 family.	0.909
infC	rplA	SAMN05428998_1045	SAMN05428998_1549	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.963
infC	rplJ	SAMN05428998_1045	SAMN05428998_1548	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.944
infC	rplK	SAMN05428998_1045	SAMN05428998_15410	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.951
infC	rplU	SAMN05428998_1045	SAMN05428998_104111	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.974
infC	rpmF	SAMN05428998_1045	SAMN05428998_11558	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.934
infC	rpsB	SAMN05428998_1045	SAMN05428998_12966	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.994
infC	rpsC	SAMN05428998_1045	SAMN05428998_1159	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.993
infC	rpsF	SAMN05428998_1045	SAMN05428998_13551	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.992
infC	rpsP	SAMN05428998_1045	SAMN05428998_104280	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988