STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF45477.1Predicted DNA-binding protein with PD1-like DNA-binding motif. (142 aa)    
Predicted Functional Partners:
SMF45488.1
Hypothetical protein.
       0.780
SMF45441.1
Transferase hexapeptide (six repeat-containing protein).
       0.773
SMF45451.1
acrylyl-CoA reductase (NADPH).
       0.773
SMF45500.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.715
SMF45429.1
Hypothetical protein.
       0.444
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.