STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF47649.1Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. (194 aa)    
Predicted Functional Partners:
SMF47643.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.799
SMF02456.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.766
SME99886.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
  
     0.581
SME99751.1
Hypothetical protein.
  
     0.547
SME99732.1
PQQ-like domain-containing protein.
  
     0.503
SMF48224.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
  
     0.477
SME96800.1
Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains.
  
     0.420
SME94367.1
Permease of the drug/metabolite transporter (DMT) superfamily.
 
     0.415
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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