STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF57123.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
SMF57130.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.596
SMF57136.1
Secondary thiamine-phosphate synthase enzyme.
       0.596
SMF57119.1
phenylacetate-CoA ligase.
       0.553
SMF57115.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.456
SME90659.1
Amino acid adenylation domain-containing protein.
     
 0.432
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
     
 0.432
SMF03952.1
Amino acid adenylation domain-containing protein.
     
 0.432
SMF57142.1
Choline dehydrogenase/4-pyridoxate dehydrogenase.
  
 
  0.432
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.