STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF60140.1Thermostable hemolysin. (227 aa)    
Predicted Functional Partners:
SMF60155.1
Pyrroloquinoline quinone (PQQ) biosynthesis protein C.
 
   
 0.961
SMF60149.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
   
 0.947
SMF60169.1
Tetratricopeptide repeat-containing protein.
 
   
 0.919
SMF60161.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.916
SMF60204.1
Methyltransferase domain-containing protein.
 
     0.587
SMF14540.1
Potassium/proton antiporter, CPA1 family.
  
     0.412
SMF60135.1
Hypothetical protein.
       0.408
SMF60212.1
Nucleoside 2-deoxyribosyltransferase.
       0.404
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.