STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF65777.1Acyl dehydratase. (158 aa)    
Predicted Functional Partners:
SMF65794.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.951
SMF58648.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.909
SME90659.1
Amino acid adenylation domain-containing protein.
    
 0.868
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
 0.868
SMF03952.1
Amino acid adenylation domain-containing protein.
    
 0.868
SMF69237.1
Amino acid adenylation domain-containing protein.
  
 0.858
SMF69245.1
Amino acid adenylation domain-containing protein.
  
 0.858
SMF41569.1
Citrate lyase subunit beta / citryl-CoA lyase/acetolactate synthase-1/2/3 large subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.702
SMF65921.1
3-hydroxy-3-methylglutaryl CoA synthase.
 
 0.690
SMF04767.1
(S)-citramalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.682
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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