STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF69101.1C4-dicarboxylate transporter, DctQ subunit. (177 aa)    
Predicted Functional Partners:
SMF69110.1
TRAP transporter, DctM subunit.
 
     0.799
SMF69084.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.798
SMF69119.1
Gluconolactonase.
       0.723
SMF25511.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.624
SMF64749.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.565
SMF25521.1
Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.538
SMF36841.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.521
SMF30389.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.510
SMF57339.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.489
SMF64751.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.474
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.