STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF73671.1Polyketide cyclase / dehydrase and lipid transport. (306 aa)    
Predicted Functional Partners:
SME90659.1
Amino acid adenylation domain-containing protein.
  
 
 0.991
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.991
SMF03952.1
Amino acid adenylation domain-containing protein.
  
 
 0.991
SMF03967.1
Amino acid adenylation domain-containing protein.
  
 
 0.967
SMF69245.1
Amino acid adenylation domain-containing protein.
  
 
 0.963
SMF69237.1
Amino acid adenylation domain-containing protein.
 
 
 0.959
SMF54959.1
Predicted TIM-barrel enzyme.
 
  
 0.932
SMF58648.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.913
SMF03908.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.910
SMF54989.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Belongs to the UPF0261 family.
 
  
 0.899
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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