STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF76012.1TRAP transporter, DctM subunit. (426 aa)    
Predicted Functional Partners:
SMF76018.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.959
SMF76023.1
Tripartite ATP-independent transporter solute receptor, DctP family.
    0.887
SME89905.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.830
SMF06946.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.795
SMF02296.1
Tripartite ATP-independent transporter solute receptor, DctP family.
    0.787
SMF51976.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.785
SME98626.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.784
SME89910.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.781
SME97422.1
C4-dicarboxylate-binding protein DctP.
 
    0.780
SMF76496.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.780
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.