STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF81543.1Transcriptional regulator with AbiEi antitoxin N-terminal domain. (304 aa)    
Predicted Functional Partners:
SMF81539.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
 
   
 0.964
SMF81692.1
C-terminal domain on Strawberry notch homologue.
  
     0.594
SMF81613.1
Ribbon-helix-helix protein, copG family.
 
     0.548
SMF81536.1
Hypothetical protein.
       0.524
SMF81712.1
Chromosome partitioning protein, ParB family.
  
     0.505
SMF81534.1
Site-specific DNA recombinase.
       0.500
SMF84491.1
Hypothetical protein.
   
    0.499
SMF81682.1
Protein of unknown function.
  
     0.498
SMF81556.1
Hypothetical protein.
 
     0.493
SMF81552.1
Uncharacterized conserved protein, DUF736 family.
 
     0.464
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.