STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF82418.1N-methylglutamate dehydrogenase subunit D. (202 aa)    
Predicted Functional Partners:
SMF82422.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
 0.999
SMF17944.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.998
SMF82428.1
Sarcosine oxidase subunit delta.
 
 0.998
SMF17933.1
Sarcosine oxidase subunit delta.
 
 0.995
SMF43259.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.985
SMF35992.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
 0.984
SMF53967.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.984
SMF24347.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.983
SMF24354.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
 0.983
SMF82432.1
N-methylglutamate dehydrogenase subunit A precursor.
 
  0.927
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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