Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG07632.1 | SMG07660.1 | SAMN05660862_0300 | SAMN05660862_0302 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein; Partial gene; manually curated. | 0.677 |
SMG07632.1 | SMG08169.1 | SAMN05660862_0300 | SAMN05660862_0355 | Gliding motility-associated C-terminal domain-containing protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.747 |
SMG07632.1 | SMG09171.1 | SAMN05660862_0300 | SAMN05660862_0439 | Gliding motility-associated C-terminal domain-containing protein. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.488 |
SMG07632.1 | SMG09174.1 | SAMN05660862_0300 | SAMN05660862_0440 | Gliding motility-associated C-terminal domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.600 |
SMG07632.1 | SMG09177.1 | SAMN05660862_0300 | SAMN05660862_0441 | Gliding motility-associated C-terminal domain-containing protein. | Starch-binding associating with outer membrane. | 0.629 |
SMG07632.1 | SMG09217.1 | SAMN05660862_0300 | SAMN05660862_0442 | Gliding motility-associated C-terminal domain-containing protein. | Protein of unknown function. | 0.701 |
SMG07632.1 | SMG09223.1 | SAMN05660862_0300 | SAMN05660862_0443 | Gliding motility-associated C-terminal domain-containing protein. | Protein of unknown function. | 0.738 |
SMG07660.1 | SMG07632.1 | SAMN05660862_0302 | SAMN05660862_0300 | Hypothetical protein; Partial gene; manually curated. | Gliding motility-associated C-terminal domain-containing protein. | 0.677 |
SMG07660.1 | SMG07677.1 | SAMN05660862_0302 | SAMN05660862_0304 | Hypothetical protein; Partial gene; manually curated. | Gliding motility-associated C-terminal domain-containing protein. | 0.666 |
SMG07660.1 | SMG08169.1 | SAMN05660862_0302 | SAMN05660862_0355 | Hypothetical protein; Partial gene; manually curated. | Type IX secretion system membrane protein, PorP/SprF family. | 0.700 |
SMG07660.1 | SMG09171.1 | SAMN05660862_0302 | SAMN05660862_0439 | Hypothetical protein; Partial gene; manually curated. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.521 |
SMG07660.1 | SMG09174.1 | SAMN05660862_0302 | SAMN05660862_0440 | Hypothetical protein; Partial gene; manually curated. | TonB-linked outer membrane protein, SusC/RagA family. | 0.551 |
SMG07660.1 | SMG09177.1 | SAMN05660862_0302 | SAMN05660862_0441 | Hypothetical protein; Partial gene; manually curated. | Starch-binding associating with outer membrane. | 0.584 |
SMG07660.1 | SMG09217.1 | SAMN05660862_0302 | SAMN05660862_0442 | Hypothetical protein; Partial gene; manually curated. | Protein of unknown function. | 0.730 |
SMG07660.1 | SMG09223.1 | SAMN05660862_0302 | SAMN05660862_0443 | Hypothetical protein; Partial gene; manually curated. | Protein of unknown function. | 0.753 |
SMG07660.1 | SMG09228.1 | SAMN05660862_0302 | SAMN05660862_0444 | Hypothetical protein; Partial gene; manually curated. | Protein of unknown function. | 0.662 |
SMG07677.1 | SMG07660.1 | SAMN05660862_0304 | SAMN05660862_0302 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein; Partial gene; manually curated. | 0.666 |
SMG07677.1 | SMG08169.1 | SAMN05660862_0304 | SAMN05660862_0355 | Gliding motility-associated C-terminal domain-containing protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.759 |
SMG07677.1 | SMG09171.1 | SAMN05660862_0304 | SAMN05660862_0439 | Gliding motility-associated C-terminal domain-containing protein. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.496 |
SMG07677.1 | SMG09174.1 | SAMN05660862_0304 | SAMN05660862_0440 | Gliding motility-associated C-terminal domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.618 |
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