STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG16311.1Cu-processing system ATP-binding protein. (241 aa)    
Predicted Functional Partners:
SMG16301.1
Cu-processing system permease protein.
 
 
 0.993
NosD
Nitrous oxidase accessory protein.
 
 
 0.982
SMG16363.1
Copper chaperone NosL.
 
 
 0.978
SMG16395.1
Copper chaperone NosL.
 
 
 0.978
NosZ
Nitrous-oxide reductase.
 
 
 0.978
SMG16424.1
Cytochrome c.
 
    0.911
GldG
ABC-2 type transport system permease protein.
  
 
 0.888
SMG10764.1
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
    
0.871
Ric
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.831
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.767
Your Current Organism:
Sphingobacterium psychroaquaticum
NCBI taxonomy Id: 561061
Other names: DSM 22418, NRRL B-59232, S. psychroaquaticum, Sphingobacterium psychroaquaticum Albert et al. 2013, Sphingobacterium sp. MOL-1, strain MOL-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.