node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PyrF | SMG31474.1 | SAMN05660862_2179 | SAMN05660862_2180 | Orotidine-5'-phosphate decarboxylase. | Thiol-disulfide isomerase or thioredoxin. | 0.792 |
PyrF | SMG31480.1 | SAMN05660862_2179 | SAMN05660862_2181 | Orotidine-5'-phosphate decarboxylase. | 23S rRNA pseudouridine955/2504/2580 synthase. | 0.781 |
SMG31474.1 | PyrF | SAMN05660862_2180 | SAMN05660862_2179 | Thiol-disulfide isomerase or thioredoxin. | Orotidine-5'-phosphate decarboxylase. | 0.792 |
SMG31474.1 | SMG31480.1 | SAMN05660862_2180 | SAMN05660862_2181 | Thiol-disulfide isomerase or thioredoxin. | 23S rRNA pseudouridine955/2504/2580 synthase. | 0.789 |
SMG31480.1 | PyrF | SAMN05660862_2181 | SAMN05660862_2179 | 23S rRNA pseudouridine955/2504/2580 synthase. | Orotidine-5'-phosphate decarboxylase. | 0.781 |
SMG31480.1 | SMG31474.1 | SAMN05660862_2181 | SAMN05660862_2180 | 23S rRNA pseudouridine955/2504/2580 synthase. | Thiol-disulfide isomerase or thioredoxin. | 0.789 |
SMG31480.1 | rplC | SAMN05660862_2181 | SAMN05660862_1620 | 23S rRNA pseudouridine955/2504/2580 synthase. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.812 |
SMG31480.1 | rplK | SAMN05660862_2181 | SAMN05660862_1394 | 23S rRNA pseudouridine955/2504/2580 synthase. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.775 |
SMG31480.1 | rplM | SAMN05660862_2181 | SAMN05660862_3612 | 23S rRNA pseudouridine955/2504/2580 synthase. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.814 |
SMG31480.1 | rplN | SAMN05660862_2181 | SAMN05660862_1610 | 23S rRNA pseudouridine955/2504/2580 synthase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.775 |
SMG31480.1 | rplO | SAMN05660862_2181 | SAMN05660862_1601 | 23S rRNA pseudouridine955/2504/2580 synthase. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.777 |
SMG31480.1 | rplQ | SAMN05660862_2181 | SAMN05660862_1592 | 23S rRNA pseudouridine955/2504/2580 synthase. | Large subunit ribosomal protein L17. | 0.780 |
SMG31480.1 | rplU | SAMN05660862_2181 | SAMN05660862_0410 | 23S rRNA pseudouridine955/2504/2580 synthase. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.781 |
SMG31480.1 | rsfS | SAMN05660862_2181 | SAMN05660862_2972 | 23S rRNA pseudouridine955/2504/2580 synthase. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.791 |
rplC | SMG31480.1 | SAMN05660862_1620 | SAMN05660862_2181 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 23S rRNA pseudouridine955/2504/2580 synthase. | 0.812 |
rplC | rplK | SAMN05660862_1620 | SAMN05660862_1394 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.997 |
rplC | rplM | SAMN05660862_1620 | SAMN05660862_3612 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplC | rplN | SAMN05660862_1620 | SAMN05660862_1610 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
rplC | rplO | SAMN05660862_1620 | SAMN05660862_1601 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
rplC | rplQ | SAMN05660862_1620 | SAMN05660862_1592 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L17. | 0.997 |