STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG32142.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
SMG32145.1
Hypothetical protein.
       0.759
SMG32176.1
Phage major capsid protein E.
       0.660
SMG32249.1
Hypothetical protein.
       0.641
SMG32259.1
Hypothetical protein.
       0.641
SMG32203.1
Hypothetical protein.
       0.636
SMG32198.1
Hypothetical protein.
       0.630
SMG32237.1
Hypothetical protein.
       0.630
SMG32378.1
Hypothetical protein.
       0.530
SMG32131.1
FRG domain-containing protein.
       0.505
Your Current Organism:
Sphingobacterium psychroaquaticum
NCBI taxonomy Id: 561061
Other names: DSM 22418, NRRL B-59232, S. psychroaquaticum, Sphingobacterium psychroaquaticum Albert et al. 2013, Sphingobacterium sp. MOL-1, strain MOL-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.