STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG34843.1SusD family protein. (470 aa)    
Predicted Functional Partners:
SMG34708.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.936
SMG34851.1
Thioredoxin-like.
  
    0.787
SMG34706.1
FecR family protein.
 
     0.783
SMG44724.1
SusD family protein.
  
    0.763
SMG51225.1
SusD family protein.
  
    0.759
SMG34481.1
SusD family protein.
  
    0.758
SMG06184.1
SusD family protein.
  
    0.757
SMG24633.1
SusD family protein.
  
    0.757
SMG21218.1
SusD family protein.
  
    0.756
SMG48850.1
SusD family protein.
  
    0.756
Your Current Organism:
Sphingobacterium psychroaquaticum
NCBI taxonomy Id: 561061
Other names: DSM 22418, NRRL B-59232, S. psychroaquaticum, Sphingobacterium psychroaquaticum Albert et al. 2013, Sphingobacterium sp. MOL-1, strain MOL-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.