Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG40572.1 | SMG40577.1 | SAMN05660862_2909 | SAMN05660862_2910 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.510 |
SMG40572.1 | SMG40581.1 | SAMN05660862_2909 | SAMN05660862_2911 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.494 |
SMG40572.1 | SMG40583.1 | SAMN05660862_2909 | SAMN05660862_2912 | Hypothetical protein. | Protein of unknown function. | 0.458 |
SMG40577.1 | SMG40572.1 | SAMN05660862_2910 | SAMN05660862_2909 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.510 |
SMG40577.1 | SMG40581.1 | SAMN05660862_2910 | SAMN05660862_2911 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.940 |
SMG40577.1 | SMG40583.1 | SAMN05660862_2910 | SAMN05660862_2912 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.685 |
SMG40577.1 | SMG40588.1 | SAMN05660862_2910 | SAMN05660862_2913 | TonB-linked outer membrane protein, SusC/RagA family. | Glycosyl hydrolase-like 10. | 0.808 |
SMG40577.1 | SMG40610.1 | SAMN05660862_2910 | SAMN05660862_2914 | TonB-linked outer membrane protein, SusC/RagA family. | Glycosyl hydrolase-like 10. | 0.687 |
SMG40581.1 | SMG40572.1 | SAMN05660862_2911 | SAMN05660862_2909 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.494 |
SMG40581.1 | SMG40577.1 | SAMN05660862_2911 | SAMN05660862_2910 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.940 |
SMG40581.1 | SMG40583.1 | SAMN05660862_2911 | SAMN05660862_2912 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.726 |
SMG40581.1 | SMG40588.1 | SAMN05660862_2911 | SAMN05660862_2913 | Starch-binding associating with outer membrane. | Glycosyl hydrolase-like 10. | 0.861 |
SMG40581.1 | SMG40610.1 | SAMN05660862_2911 | SAMN05660862_2914 | Starch-binding associating with outer membrane. | Glycosyl hydrolase-like 10. | 0.746 |
SMG40583.1 | SMG40572.1 | SAMN05660862_2912 | SAMN05660862_2909 | Protein of unknown function. | Hypothetical protein. | 0.458 |
SMG40583.1 | SMG40577.1 | SAMN05660862_2912 | SAMN05660862_2910 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.685 |
SMG40583.1 | SMG40581.1 | SAMN05660862_2912 | SAMN05660862_2911 | Protein of unknown function. | Starch-binding associating with outer membrane. | 0.726 |
SMG40583.1 | SMG40588.1 | SAMN05660862_2912 | SAMN05660862_2913 | Protein of unknown function. | Glycosyl hydrolase-like 10. | 0.604 |
SMG40583.1 | SMG40610.1 | SAMN05660862_2912 | SAMN05660862_2914 | Protein of unknown function. | Glycosyl hydrolase-like 10. | 0.616 |
SMG40588.1 | SMG40577.1 | SAMN05660862_2913 | SAMN05660862_2910 | Glycosyl hydrolase-like 10. | TonB-linked outer membrane protein, SusC/RagA family. | 0.808 |
SMG40588.1 | SMG40581.1 | SAMN05660862_2913 | SAMN05660862_2911 | Glycosyl hydrolase-like 10. | Starch-binding associating with outer membrane. | 0.861 |
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