Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG06041.1 | SMG13388.1 | SAMN05660862_0110 | SAMN05660862_0768 | Calcineurin-like phosphoesterase. | Exonuclease SbcC. | 0.991 |
SMG06041.1 | SMG45067.1 | SAMN05660862_0110 | SAMN05660862_3243 | Calcineurin-like phosphoesterase. | Putative mRNA 3-end processing factor. | 0.716 |
SMG06041.1 | polA | SAMN05660862_0110 | SAMN05660862_3273 | Calcineurin-like phosphoesterase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.975 |
SMG06041.1 | rpoB | SAMN05660862_0110 | SAMN05660862_1390 | Calcineurin-like phosphoesterase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.425 |
SMG06848.1 | SMG45067.1 | SAMN05660862_0222 | SAMN05660862_3243 | DNA polymerase (family 10). | Putative mRNA 3-end processing factor. | 0.721 |
SMG06848.1 | polA | SAMN05660862_0222 | SAMN05660862_3273 | DNA polymerase (family 10). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.910 |
SMG13388.1 | SMG06041.1 | SAMN05660862_0768 | SAMN05660862_0110 | Exonuclease SbcC. | Calcineurin-like phosphoesterase. | 0.991 |
SMG13388.1 | SMG45067.1 | SAMN05660862_0768 | SAMN05660862_3243 | Exonuclease SbcC. | Putative mRNA 3-end processing factor. | 0.677 |
SMG13388.1 | polA | SAMN05660862_0768 | SAMN05660862_3273 | Exonuclease SbcC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.915 |
SMG13388.1 | sbcD | SAMN05660862_0768 | SAMN05660862_0769 | Exonuclease SbcC. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.999 |
SMG22767.1 | SMG45067.1 | SAMN05660862_1456 | SAMN05660862_3243 | WD domain-containing protein, G-beta repeat-containing protein. | Putative mRNA 3-end processing factor. | 0.969 |
SMG22767.1 | SMG46040.1 | SAMN05660862_1456 | SAMN05660862_3258 | WD domain-containing protein, G-beta repeat-containing protein. | RNA polymerase Rpb6. | 0.764 |
SMG22767.1 | gpmI | SAMN05660862_1456 | SAMN05660862_0227 | WD domain-containing protein, G-beta repeat-containing protein. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.945 |
SMG22767.1 | rpoA | SAMN05660862_1456 | SAMN05660862_1593 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.775 |
SMG22767.1 | rpoB | SAMN05660862_1456 | SAMN05660862_1390 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.806 |
SMG45067.1 | SMG06041.1 | SAMN05660862_3243 | SAMN05660862_0110 | Putative mRNA 3-end processing factor. | Calcineurin-like phosphoesterase. | 0.716 |
SMG45067.1 | SMG06848.1 | SAMN05660862_3243 | SAMN05660862_0222 | Putative mRNA 3-end processing factor. | DNA polymerase (family 10). | 0.721 |
SMG45067.1 | SMG13388.1 | SAMN05660862_3243 | SAMN05660862_0768 | Putative mRNA 3-end processing factor. | Exonuclease SbcC. | 0.677 |
SMG45067.1 | SMG22767.1 | SAMN05660862_3243 | SAMN05660862_1456 | Putative mRNA 3-end processing factor. | WD domain-containing protein, G-beta repeat-containing protein. | 0.969 |
SMG45067.1 | SMG46040.1 | SAMN05660862_3243 | SAMN05660862_3258 | Putative mRNA 3-end processing factor. | RNA polymerase Rpb6. | 0.778 |
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