STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG51075.1Protein of unknown function. (349 aa)    
Predicted Functional Partners:
SMG51077.1
Hypothetical protein.
       0.834
SMG51080.1
Starch-binding associating with outer membrane.
       0.821
SMG51073.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.778
SMG51072.1
Starch-binding associating with outer membrane.
       0.770
SMG51069.1
Fasciclin domain-containing protein.
       0.761
SMG51066.1
Protein of unknown function.
       0.760
SMG51083.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.741
SMG51063.1
Protein of unknown function.
       0.737
SMG51060.1
F5/8 type C domain-containing protein.
       0.646
SMG51056.1
Protein of unknown function.
       0.634
Your Current Organism:
Sphingobacterium psychroaquaticum
NCBI taxonomy Id: 561061
Other names: DSM 22418, NRRL B-59232, S. psychroaquaticum, Sphingobacterium psychroaquaticum Albert et al. 2013, Sphingobacterium sp. MOL-1, strain MOL-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.