STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ22666.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
AFZ22446.1
Hypothetical protein.
  
    0.719
AFZ25157.1
Hypothetical protein.
  
     0.715
AFZ22838.1
Molecular chaperone.
  
   
 0.697
AFZ26834.1
Hypothetical protein.
  
     0.687
AFZ23571.1
Hypothetical protein.
  
     0.663
AFZ24069.1
P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein.
  
     0.635
pcxA
CemA family; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
       0.634
AFZ27783.1
Hypothetical protein.
  
     0.633
AFZ25932.1
Hypothetical protein.
  
     0.619
AFZ23042.1
Hypothetical protein.
  
     0.614
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.