STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ23534.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
AFZ25122.1
Hypothetical protein.
  
     0.761
AFZ23250.1
PFAM: Ycf66 protein N-terminus.
  
     0.758
AFZ23029.1
Hypothetical protein.
  
     0.751
AFZ23385.1
Hypothetical protein.
  
     0.748
AFZ25596.1
Hypothetical protein.
  
     0.748
AFZ26432.1
Hypothetical protein.
  
     0.743
AFZ23165.1
Hypothetical protein.
  
     0.730
AFZ23828.1
Hypothetical protein.
  
     0.730
AFZ26679.1
Hypothetical protein.
  
 
   0.726
AFZ25935.1
Hypothetical protein.
  
     0.723
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.