STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ23636.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
AFZ23637.1
TIGRFAM: DNA sulfur modification protein DndD.
 
     0.945
AFZ23635.1
DNA phosphorothioation system restriction enzyme; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: DNA phosphorothioation system restriction enzyme.
 
     0.791
AFZ23646.1
TIGRFAM: DNA sulfur modification protein DndD.
 
     0.729
AFZ23647.1
DNA sulfur modification protein DndE; PFAM: Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE.
  
     0.725
AFZ23640.1
TIGRFAM: dnd system-associated protein 4.
 
     0.708
AFZ23643.1
Putative sulfurtransferase DndC; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: putative sulfurtransferase DndC.
  
     0.666
AFZ23659.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
  
     0.664
AFZ23642.1
DGQHR domain-containing protein; TIGRFAM: DGQHR domain.
  
     0.627
AFZ24279.1
Hypothetical protein.
  
     0.594
AFZ27084.1
Hypothetical protein.
  
     0.563
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.