STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ23745.1PFAM: Tetratricopeptide repeat. (1063 aa)    
Predicted Functional Partners:
AFZ23743.1
Putative transmembrane sensor domain protein; PFAM: CHASE2 domain.
 
     0.741
AFZ23744.1
PFAM: Domain of Unknown Function (DUF928).
 
     0.735
AFZ23742.1
PFAM: Protein of unknown function (DUF1822).
 
 
   0.731
AFZ23741.1
Hypothetical protein.
  
    0.652
AFZ26549.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat; NB-ARC domain.
  
     0.646
AFZ25223.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat; NB-ARC domain; manually curated.
  
     0.614
AFZ26376.1
PFAM: Tetratricopeptide repeat.
  
     0.600
AFZ25309.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: Dynamin family; DnaJ domain.
   
 0.551
AFZ27793.1
WD40 repeat-containing protein; PFAM: DnaJ domain; WD domain, G-beta repeat; Tetratricopeptide repeat.
   
  0.537
AFZ23580.1
PFAM: Ferric reductase like transmembrane component; FAD-binding domain; Ferric reductase NAD binding domain.
  
 
  0.499
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.