STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ24185.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AFZ24183.1
TIGRFAM: conserved hypothetical protein, phage tail-like region.
       0.668
AFZ24184.1
PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein domain.
       0.668
AFZ24186.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
       0.643
AFZ24182.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
       0.456
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.