Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFZ24376.1PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. (277 aa)    
Predicted Functional Partners:
AFZ24375.1
Hypothetical protein.
       0.773
AFZ23354.1
Putative flavoprotein involved in K+ transport; PFAM: Flavin-binding monooxygenase-like.
  
    0.573
AFZ27961.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase.
    
   0.517
AFZ24373.1
PFAM: Alkaline phosphatase.
   
 
 0.491
AFZ24374.1
Hypothetical protein.
       0.459
AFZ24099.1
PAS domain S-box; PFAM: GAF domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Transcriptional regulatory protein, C terminal; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box.
     
 0.436
AFZ23765.1
Hypothetical protein.
  
    0.429
AFZ24377.1
Hypothetical protein.
       0.420
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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