STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ25366.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
AFZ27082.1
Hypothetical protein.
  
     0.774
AFZ27690.1
Hypothetical protein.
  
     0.772
AFZ24542.1
Hypothetical protein.
  
     0.769
AFZ22897.1
Hypothetical protein.
  
     0.768
AFZ26935.1
Hypothetical protein.
  
     0.767
hetR
Peptidase family S48; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity; Belongs to the peptidase S48 family.
  
     0.766
AFZ27337.1
Hypothetical protein.
  
     0.761
AFZ26923.1
Hypothetical protein.
  
     0.756
AFZ26364.1
Hypothetical protein.
  
     0.754
AFZ27336.1
Hypothetical protein.
  
     0.754
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.