STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ25370.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (327 aa)    
Predicted Functional Partners:
AFZ27924.1
PFAM: Glycosyl transferase family 2.
  
     0.737
AFZ27654.1
PFAM: Glycosyl transferase family 2.
  
     0.735
AFZ22794.1
Glycosyl transferase.
  
     0.732
AFZ26415.1
PFAM: Glycosyl transferase family 2.
  
     0.708
AFZ27204.1
PFAM: Glycosyl transferase family 2.
  
     0.705
AFZ24747.1
PFAM: Glycosyl transferase family 2.
 
     0.687
AFZ26768.1
PFAM: Glycosyl transferase family 2.
  
     0.683
AFZ23240.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
     0.655
AFZ23141.1
Hypothetical protein.
  
     0.630
AFZ23947.1
PFAM: Glycosyl transferase family 2.
 
   
 0.628
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.