STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ27334.1PFAM: ADP-ribosylglycohydrolase. (313 aa)    
Predicted Functional Partners:
AFZ27333.1
PFAM: ADP-ribosylglycohydrolase.
 
    
0.609
AFZ23167.1
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein; PFAM: Macro domain.
    
 0.502
AFZ23606.1
PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.465
AFZ26801.1
Nitrogen regulatory protein PII.
    
 
 0.465
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.