STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ28073.1Conserved repeat protein; PFAM: Domain of unknown function DUF11; Cna protein B-type domain; TIGRFAM: conserved repeat domain. (1689 aa)    
Predicted Functional Partners:
AFZ23693.1
PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.974
AFZ25962.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2326).
  
     0.747
AFZ27011.1
PFAM: Domain of unknown function (DUF1929); Glyoxal oxidase N-terminus.
  
     0.732
AFZ22966.1
Protein of unknown function (DUF1350).
  
     0.725
AFZ26420.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
  
     0.677
AFZ25410.1
PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.654
AFZ27318.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.636
AFZ27012.1
Putative iron-dependent peroxidase; PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family.
  
   
 0.624
AFZ24949.1
Hypothetical protein.
  
     0.622
AFZ23449.1
Hypothetical protein.
  
     0.607
Your Current Organism:
Cylindrospermum stagnale
NCBI taxonomy Id: 56107
Other names: C. stagnale PCC 7417, Cylindrospermum sp. ATCC 29204, Cylindrospermum sp. PCC 7417, Cylindrospermum stagnale PCC 7417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.