STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY80255.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (390 aa)    
Predicted Functional Partners:
AFY80256.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
    0.895
AFY80257.1
Hypothetical protein.
 
    0.864
AFY80254.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    
0.695
AFY84860.1
Hypothetical protein.
  
     0.651
AFY83391.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.647
AFY81580.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase.
  
   
 0.638
AFY81577.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.624
AFY81880.1
Hypothetical protein.
  
     0.621
AFY81579.1
Hypothetical protein.
  
     0.611
AFY82325.1
Hypothetical protein.
  
     0.606
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.