STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY80590.1Hypothetical protein; PFAM: CHAD domain. (336 aa)    
Predicted Functional Partners:
AFY80589.1
Hypothetical protein.
       0.516
AFY80591.1
PFAM: Bacterial regulatory proteins, crp family.
       0.488
AFY80757.1
Hypothetical protein.
  
     0.473
AFY85181.1
Hypothetical protein.
  
     0.472
AFY85027.1
Hypothetical protein.
 
     0.468
AFY80719.1
Hypothetical protein.
  
     0.444
AFY81741.1
Hypothetical protein.
  
     0.422
AFY81138.1
Hypothetical protein.
  
     0.421
AFY83253.1
Hypothetical protein.
  
     0.421
AFY80067.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
     0.407
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.