STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY80645.1PFAM: Aldo/keto reductase family. (393 aa)    
Predicted Functional Partners:
AFY80643.1
Hypothetical protein.
       0.757
AFY80644.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
       0.757
AFY80233.1
PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein.
 
    0.468
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.446
AFY80647.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.442
AFY80642.1
Protoheme ferro-lyase (ferrochelatase); PFAM: Ferrochelatase; Belongs to the ferrochelatase family.
       0.438
AFY81740.1
Fatty aldehyde decarbonylase; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
 
   0.424
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.