STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY81546.1Hypothetical protein; PFAM: YCII-related domain. (88 aa)    
Predicted Functional Partners:
AFY80757.1
Hypothetical protein.
  
     0.661
AFY80296.1
Hypothetical protein.
  
     0.646
AFY81801.1
PFAM: Predicted metal-binding protein (DUF2103).
  
     0.579
AFY81545.1
Hypothetical protein.
 
     0.568
AFY82129.1
Hypothetical protein.
  
     0.547
AFY84103.1
PFAM: Protein of unknown function (DUF3539).
  
     0.545
AFY81547.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
       0.516
AFY84883.1
Hypothetical protein.
  
     0.494
AFY81554.1
Putative thioesterase; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily.
  
     0.487
AFY84758.1
PFAM: Membrane protein of unknown function.
  
     0.479
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.