node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY81596.1 | AFY81598.1 | Oscil6304_1926 | Oscil6304_1928 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | Hypothetical protein. | 0.927 |
AFY81596.1 | rnpA | Oscil6304_1926 | Oscil6304_1929 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.874 |
AFY81596.1 | rplC | Oscil6304_1926 | Oscil6304_2723 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.562 |
AFY81596.1 | rplD | Oscil6304_1926 | Oscil6304_2724 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.698 |
AFY81596.1 | rplF | Oscil6304_1926 | Oscil6304_2737 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.404 |
AFY81596.1 | rplU | Oscil6304_1926 | Oscil6304_0247 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.525 |
AFY81596.1 | rpmH | Oscil6304_1926 | Oscil6304_1930 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family. | 0.695 |
AFY81596.1 | rpsJ | Oscil6304_1926 | Oscil6304_4184 | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.469 |
AFY81598.1 | AFY81596.1 | Oscil6304_1928 | Oscil6304_1926 | Hypothetical protein. | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | 0.927 |
AFY81598.1 | rnpA | Oscil6304_1928 | Oscil6304_1929 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.801 |
AFY81598.1 | rplC | Oscil6304_1928 | Oscil6304_2723 | Hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.752 |
AFY81598.1 | rplD | Oscil6304_1928 | Oscil6304_2724 | Hypothetical protein. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.769 |
AFY81598.1 | rplF | Oscil6304_1928 | Oscil6304_2737 | Hypothetical protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.704 |
AFY81598.1 | rplU | Oscil6304_1928 | Oscil6304_0247 | Hypothetical protein. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.707 |
AFY81598.1 | rpmH | Oscil6304_1928 | Oscil6304_1930 | Hypothetical protein. | PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family. | 0.918 |
AFY81598.1 | rpsJ | Oscil6304_1928 | Oscil6304_4184 | Hypothetical protein. | Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.736 |
AFY81598.1 | rpsL | Oscil6304_1928 | Oscil6304_4180 | Hypothetical protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.733 |
AFY81598.1 | rpsT | Oscil6304_1928 | Oscil6304_5929 | Hypothetical protein. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.727 |
rnpA | AFY81596.1 | Oscil6304_1929 | Oscil6304_1926 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | 0.874 |
rnpA | AFY81598.1 | Oscil6304_1929 | Oscil6304_1928 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein. | 0.801 |