STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY82627.1PFAM: Protein of unknown function (DUF820). (224 aa)    
Predicted Functional Partners:
AFY80579.1
Membrane protein involved in colicin uptake; PFAM: Protein of unknown function (DUF820).
  
     0.615
AFY84649.1
PFAM: Protein of unknown function (DUF820).
  
     0.560
AFY81350.1
PFAM: Protein of unknown function (DUF820).
  
     0.558
AFY84650.1
PFAM: Protein of unknown function (DUF820).
  
     0.554
AFY81514.1
PFAM: Protein of unknown function (DUF820).
  
     0.535
AFY84108.1
PFAM: Protein of unknown function (DUF820).
  
     0.523
AFY82522.1
PFAM: Protein of unknown function (DUF820).
  
     0.514
AFY81418.1
PFAM: Protein of unknown function (DUF820).
  
     0.499
AFY82670.1
Hypothetical protein; PFAM: HNH endonuclease.
  
     0.499
AFY80883.1
PFAM: HNH endonuclease.
  
     0.488
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.