STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY82909.1Hypothetical protein. (366 aa)    
Predicted Functional Partners:
AFY82908.1
Methyltransferase family protein; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.
 
     0.794
AFY81451.1
NIL domain-containing protein; PFAM: NIL domain.
  
     0.705
AFY83760.1
Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
  
     0.691
AFY81679.1
Hypothetical protein; PFAM: Hemerythrin HHE cation binding domain.
  
     0.678
AFY84497.1
PFAM: F subunit of K+-transporting ATPase (Potass_KdpF); TIGRFAM: K+-transporting ATPase, KdpF subunit.
  
     0.669
AFY85323.1
PFAM: Predicted membrane protein (DUF2231).
 
     0.653
AFY82222.1
Hypothetical protein.
  
     0.594
AFY81094.1
Hypothetical protein; PFAM: Domain of unknown function (DUF2382).
  
     0.581
AFY82064.1
Putative integral membrane protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.561
AFY82154.1
Hypothetical protein.
  
     0.537
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.