STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY83295.1Sporulation/spore germination protein; PFAM: Sporulation and spore germination. (189 aa)    
Predicted Functional Partners:
AFY83770.1
Nitrous oxidase accessory protein; PFAM: Protein of unknown function (DUF1565); S-layer homology domain; TIGRFAM: parallel beta-helix repeat (two copies).
  
     0.763
AFY84023.1
Hypothetical protein.
  
     0.756
AFY80750.1
Subtilisin-like serine protease; PFAM: Proprotein convertase P-domain; Subtilase family.
  
     0.751
AFY84148.1
Hypothetical protein.
  
     0.733
AFY80119.1
N-acetylmuramoyl-L-alanine amidase; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase.
  
     0.728
AFY84298.1
Hypothetical protein.
  
     0.726
AFY80299.1
Hypothetical protein.
  
     0.724
hetR
Peptidase family S48; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity; Belongs to the peptidase S48 family.
  
     0.723
AFY80231.1
Hypothetical protein.
  
     0.717
AFY82086.1
Hypothetical protein.
  
     0.716
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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