Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY84051.1 | AFY84052.1 | Oscil6304_4535 | Oscil6304_4536 | PFAM: HindIII restriction endonuclease. | PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.754 |
AFY84051.1 | AFY84053.1 | Oscil6304_4535 | Oscil6304_4537 | PFAM: HindIII restriction endonuclease. | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | 0.415 |
AFY84052.1 | AFY84051.1 | Oscil6304_4536 | Oscil6304_4535 | PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | PFAM: HindIII restriction endonuclease. | 0.754 |
AFY84052.1 | AFY84053.1 | Oscil6304_4536 | Oscil6304_4537 | PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | 0.428 |
AFY84053.1 | AFY84051.1 | Oscil6304_4537 | Oscil6304_4535 | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | PFAM: HindIII restriction endonuclease. | 0.415 |
AFY84053.1 | AFY84052.1 | Oscil6304_4537 | Oscil6304_4536 | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.428 |
AFY84053.1 | AFY84054.1 | Oscil6304_4537 | Oscil6304_4538 | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. | 0.424 |
AFY84054.1 | AFY84053.1 | Oscil6304_4538 | Oscil6304_4537 | PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. | TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. | 0.424 |