STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY84469.1PFAM: KAP family P-loop domain. (683 aa)    
Predicted Functional Partners:
AFY84471.1
Hypothetical protein.
 
     0.867
AFY84466.1
Hypothetical protein.
 
     0.782
AFY84464.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family; 3'-5' exonuclease.
 
     0.779
AFY81189.1
Hypothetical protein.
 
     0.658
AFY81429.1
ATP-dependent transcriptional regulator; PFAM: NB-ARC domain.
  
     0.601
AFY83205.1
Hypothetical protein.
  
     0.598
AFY84470.1
PFAM: KAP family P-loop domain.
 
    
0.558
AFY82855.1
Putative kinase; PFAM: Chromatin associated protein KTI12.
  
     0.551
AFY80727.1
Intein/homing endonuclease; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.550
AFY81798.1
NurA domain-containing protein; PFAM: NurA domain.
   
 
 0.519
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.