STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY84473.1Kef-type K+ ransport system, predicted NAD-binding component; PFAM: TrkA-N domain. (565 aa)    
Predicted Functional Partners:
AFY82269.1
Putative membrane protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.610
AFY80368.1
Putative membrane protein.
  
     0.553
AFY85097.1
Ribosomal RNA small subunit methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.550
AFY83238.1
PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.
  
 
 0.546
AFY84294.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
  
 
 0.546
AFY80469.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
    0.517
AFY81590.1
Hypothetical protein.
  
     0.513
psbT
Photosystem II reaction centre T protein; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
  
     0.486
AFY81827.1
Hypothetical protein.
  
     0.483
AFY85386.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.478
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.