STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY84589.1ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter. (430 aa)    
Predicted Functional Partners:
AFY84590.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
 0.999
AFY84662.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
 0.995
AFY84663.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
  
  
 
0.919
AFY84591.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.722
AFY84666.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.653
AFY84592.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 
 0.594
AFY81377.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.568
AFY81578.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.568
AFY82283.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.568
AFY82771.1
Putative amidophosphoribosyltransferase; TIGRFAM: comF family protein.
   
    0.528
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.