STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY84604.1Putative metal-binding protein; PFAM: Protein of unknown function (DUF1636). (137 aa)    
Predicted Functional Partners:
AFY80788.1
PFAM: Protein of unknown function (DUF1643).
  
     0.538
AFY84605.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
       0.510
AFY84548.1
Hypothetical protein; PFAM: MORN repeat.
  
   
 0.475
AFY82816.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
  
 0.468
AFY81715.1
Precorrin isomerase; PFAM: MerR family regulatory protein; Precorrin-8X methylmutase.
 
     0.461
AFY84594.1
Hypothetical protein.
  
     0.453
AFY84454.1
Hypothetical protein; PFAM: Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein.
  
     0.429
AFY83350.1
Hypothetical protein.
  
     0.409
AFY82819.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.407
AFY84612.1
PFAM: Dynamin family.
  
     0.401
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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